Health care, medical Jobs in Africa

81 jobs found

Aga Khan Hospitals

Clinical Bioinformatician, Cancer Centre

Nairobi

Kenya

Aga Khan Hospitals

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Kenya

AIC Kijabe Hospital

Clinical Instructor

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Gertrude's Children's Hospital

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Kenya

Aga Khan Hospitals

Lab Associate, NGS, Cancer Centre

Nairobi

Kenya

Intersect Consortium

Senior Internal Audit Executive

Lagos

Nigeria

MEDECINS SAN FRONTIERES

Head of Logistics | MSF Ubuntu

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MEDECINS SAN FRONTIERES

Head of ICT - MSF Ubuntu

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Oasis Outsourcing

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Nairobi

Kenya

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Seniority (Health care, medical)

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Aga Khan Hospitals

Health care + 1 more

Clinical Bioinformatician, Cancer Centre

Job details

Contract Type

Description

Requirements

  • Master’s degree in bioinformatics, Computational Biology, Genomics, Molecular Biology, or a related field.
  • A PhD in a relevant discipline is an added advantage.
  • Additional training or certification in clinical genomics, molecular diagnostics, or data science is desirable.

Relevant Experience

  • Minimum 2–3 years of experience in clinical or translational bioinformatics, ideally with NGS data analysis.
  • Proficiency with bioinformatics tools and programming languages (e.g., Python, R, bash, workflow managers like Nextflow or Snakemake).
  • Experience with standard variant annotation and filtering tools (e.g., VEP, ANNOVAR, GATK, bcftools, samtools).
  • Strong working knowledge of human genetics, including Mendelian inheritance, variant pathogenicity, and cancer genomics.
  • Familiarity with clinical variant classification guidelines (e.g., ACMG, AMP, CAP).
  • Excellent analytical and problem-solving skills.
  • Effective verbal and written communication skills to present results to non-technical audiences

Personal Characteristics & Behaviours

  • Analytical and Detail-Oriented: Demonstrates strong attention to accuracy and precision when handling complex genomic data and variant interpretations.
  • Collaborative: Works effectively within interdisciplinary teams of clinicians, laboratory scientists, and researchers, fostering open communication and shared goals.
  • Maintains the highest standards of integrity and confidentiality when handling sensitive patient genetic information.
  • Organized and Accountable: Manages multiple analyses and reporting timelines efficiently while maintaining thorough documentation.
  • Effective Communicator: Able to clearly explain complex genomic concepts to non-specialist audiences, including clinicians and administrators.
  • Committed to continuous improvement and adherence to clinical laboratory standards and best practices


Responsibilities

Genomic Data Analysis and Interpretation

  • Process and analyze NGS data from germline and somatic sources (e.g., whole exome sequencing, targeted panels).
  • Perform quality control, alignment, variant calling, annotation, and filtering of sequencing data.
  • Interpret and classify genetic variants based on clinical relevance using established guidelines (e.g., ACMG/AMP).

Clinical Reporting and Collaboration

  • Collaborate with clinical laboratory scientists, physicians, and genetic counselors to review variant interpretations.
  • Contribute to multidisciplinary discussions for patient case reviews.
  • Participate with clinicians in preparing clinical reports that summarize genomic findings in a clear and actionable manner.

Data Management, Tools, and Pipeline Optimization

  • Maintain and enhance bioinformatics pipelines and databases used in variant analysis.
  • Implement best practices for data management, version control, and documentation.
  • Evaluate new bioinformatics tools and methods to improve analysis accuracy and efficiency.

Research, Innovation, and Capacity Building

  • Support research projects focused on rare genetic disorders and cancer genomics.
  • Contribute to publications, presentations, and development of new analytical approaches.
  • Provide training or mentorship to junior staff and students in genomic data analysis.


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